miRBase entry: api-mir-3050

Stem-loop api-mir-3050


Accession
MI0014009
Description
Acyrthosiphon pisum api-mir-3050 precursor miRNA


Sequence

UGAGAUCUUGAUAAACUCGCCUgugaauuuuuaaaacuaggcgaggauauaaagaucuuauu
(((((((((.(((..(((((((((...........)).)))))))..))).)))))))))..

Structure
--         G   AA       -  gaau 
  UGAGAUCUU AUA  CUCGCCU gu    u
  ||||||||| |||  ||||||| ||    u
  auucuagaa uau  gagcgga ca    u
uu         a   ag       u  aaau 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
GL349674.1: 1167920-1167981 [+]

Database links

Mature api-miR-3050

Accession MIMAT0014791
Description Acyrthosiphon pisum api-miR-3050 mature miRNA
Sequence 1 - UGAGAUCUUGAUAAACUCGCCU - 22
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 20444247
    Bioinformatic prediction, deep sequencing of microRNAs and expression analysis during phenotypic plasticity in the pea aphid, Acyrthosiphon pisum
    Legeai F, Rizk G, Walsh T, Edwards O, Gordon K, Lavenier D, Leterme N, Méreau A, Nicolas J, Tagu D, Jaubert-Possamai S
    BMC Genomics (2010) 11:281