miRBase entry: mmu-mir-3070-1

Stem-loop mmu-mir-3070-1


Accession
MI0014032
Description
Mus musculus mmu-mir-3070-1 precursor miRNA
Gene family
MIPF0001172; mir-3070


Sequence

150 reads, 8 reads per million, 26 experiments
gugcugagugaggcugAGCCCCUGACCUUGAACCUGGGAuccuauccaugaucuccUGGUGCUACCGUCAGGGGUAGAuuccuugucau
....(((..((((....(((((((((.....(((.((((((........)))).)).)))......))))))))).....)))).))).

Structure
gugc   gu    -cugA         -CUUGA   U  -    cua 
    uga  gagg     GCCCCUGAC      ACC GG GAuc   u
    |||  ||||     |||||||||      ||| || ||||    
    acu  uucc     UGGGGACUG      UGG cc cuag   c
---u   -g    uuAGA         CCAUCG   U  u    uac 


Annotation confidence High
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Genome context
chr12: 109587943-109588031 [+]
Clustered miRNAs
13 other miRNAs are < 10 kb from mmu-mir-3070-1
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-3070-5p

Accession MIMAT0014846
Description Mus musculus mmu-miR-3070-5p mature miRNA
Sequence 17 - AGCCCCUGACCUUGAACCUGGGA - 39
Evidence experimental
Illumina [1]

Mature mmu-miR-3070-3p

Accession MIMAT0014847
Description Mus musculus mmu-miR-3070-3p mature miRNA
Sequence 57 - UGGUGCUACCGUCAGGGGUAGA - 78
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009