Stem-loop sequence mmu-mir-3078

Accession MI0014041
Description Mus musculus miR-3078 stem-loop
Stem-loop 
  ug    a  g    -    c   ga  -      a  uu  a 
ac  gcag cu cccc aaag cua  cu gcagcu cc  gu u
||  |||| || |||| |||| |||  || |||||| ||  || u
ug  uguc ga gggg uuuc gau  gg cguugg gg  cg g
  uu    -  a    a    u   gg  u      -  uu  u
Get sequence
Deep sequencing
96 reads, 17 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr14: 64591185-64591271 [+]
intergenic
Clustered miRNAs
< 10kb from mmu-mir-3078
mmu-mir-124-1 chr14: 64590657-64590741 [+]
mmu-mir-3078 chr14: 64591185-64591271 [+]
Database links

Mature sequence mmu-miR-3078-5p

Accession MIMAT0014864
Previous IDs mmu-miR-3078
Sequence

16 -  

caaagccuagacugcagcuaccu

 - 38

Get sequence
Deep sequencing 81 reads, 12 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-3078-3p

Accession MIMAT0014865
Previous IDs mmu-miR-3078*
Sequence

55 -  

uugcugggguagucuuuagg

 - 74

Get sequence
Deep sequencing 13 reads, 7 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).