Stem-loop sequence mmu-mir-3091

Accession MI0014084
Description Mus musculus miR-3091 stem-loop
Stem-loop 
    -      c a    u     ug        gac 
ugcu ugcggg c uggg cuggu  ggcccgca   u
|||| |||||| | |||| |||||  ||||||||   c
augg gcgucc g acuc gacca  ccgggcgu   g
    u      a a    u     gu        gag
Get sequence
Deep sequencing
300 reads, 37 experiments
Genome context
Coordinates (GRCm38) Overlapping transcripts
chr2: 180257536-180257611 [+]
sense
OTTMUST00000039067 ; Rps21-004; intron 1
OTTMUST00000039066 ; Rps21-003; intron 1
OTTMUST00000039065 ; Rps21-002; intron 1
OTTMUST00000039064 ; Rps21-001; intron 1
ENSMUST00000125301 ; Rps21-004; intron 1
ENSMUST00000145043 ; Rps21-003; intron 1
ENSMUST00000148629 ; Rps21-002; intron 1
ENSMUST00000059080 ; Rps21-001; intron 1
Database links

Mature sequence mmu-miR-3091-5p

Accession MIMAT0014903
Sequence

12 -  

caugggucugguugggcccgc

 - 32

Get sequence
Deep sequencing 22 reads, 15 experiments
Evidence experimental; Solexa [1]
Predicted targets

Mature sequence mmu-miR-3091-3p

Accession MIMAT0014904
Sequence

45 -  

cgggccugaccagucucaagac

 - 66

Get sequence
Deep sequencing 43 reads, 23 experiments
Evidence experimental; Solexa [1]
Predicted targets

References

1
PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).