miRBase entry: mmu-mir-344e

Stem-loop mmu-mir-344e


Accession
MI0014094
Symbol
MGI: Mir344e
Description
Mus musculus mmu-mir-344e precursor miRNA
Gene family
MIPF0000267; mir-344

Literature search
10 open access papers mention mmu-mir-344e
(34 sentences)

Sequence

31 reads, 10 reads per million, 11 experiments
caguCAGGCUUCUGGCUAUAUUCCaggacuuaccugguccugGAUAUAACCAAAGCCUGACUAUau
.((((((((((.(((.(((((.((((((((.....))))))))))))).)))))))))))))....

Structure
---c          C   C     U        u 
    aguCAGGCUU UGG UAUAU CCaggacu a
    |||||||||| ||| ||||| |||||||| c
    UCAGUCCGAA ACC AUAUA Gguccugg c
uaUA          -   A     -        u 


Annotation confidence Not enough data
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Genome context
chr7: 61735537-61735602 [-]
Clustered miRNAs
3 other miRNAs are < 10 kb from mmu-mir-344e
Name Accession Chromosome Start End Strand Confidence




Database links

Mature mmu-miR-344e-5p

Accession MIMAT0014923
Description Mus musculus mmu-miR-344e-5p mature miRNA
Sequence 5 - CAGGCUUCUGGCUAUAUUCC - 24
Evidence experimental
Illumina [1]

Mature mmu-miR-344e-3p

Accession MIMAT0014924
Description Mus musculus mmu-miR-344e-3p mature miRNA
Sequence 43 - GAUAUAACCAAAGCCUGACUAU - 64
Evidence experimental
Illumina [1]
Database links
Predicted targets

References

  1. PubMed ID: 20413612
    Mammalian microRNAs: experimental evaluation of novel and previously annotated genes
    "Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP"
    "Genes Dev (2010) 24:992-1009