Stem-loop sequence mmu-mir-344b

Accession

MI0014095 (change log)

Symbol

MGI:Mir344b

Description

Mus musculus miR-344b stem-loop

Gene family

MIPF0000267; mir-344

Literature search

10 open access papers mention mmu-mir-344b
(106 sentences)

Stem-loop

   --au          cc        guu    u 
5'     cagucaggcu  uggcuaaa   cagc u
       ||||||||||  ||||||||   |||| u
3'     gucaguccga  accgauuu   gucg c
   gaau          -a        -ac    a 

Deep sequencing

2334 reads, 0 reads per million, 37 experiments

Confidence

Annotation confidence: not enough data

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Genome context

• Coordinates (GRCm38; GCA_000001635.2): chr7: 61790519-61790581 [-]
• Overlapping transcripts:

  intergenic

Database links

• EntrezGene:Mir344b
• MGI:Mir344b
• RNAcentral:URS000075AA7A_10090
• miRBase Tracker:MI0014095

Mature sequence mmu-miR-344b-5p

• Accession: MIMAT0014925
• Previous IDs: mmu-miR-344b*
• Sequence: 4 - agucaggcuccuggcuaaaguuc - 26
• Deep sequencing: 13 reads, 5 experiments
• Evidence: experimental; Illumina [1]
• Predicted targets:
  • TargetScanVert:mmu-miR-344b-5p
  • miRDB:mmu-miR-344b-5p

Mature sequence mmu-miR-344b-3p

• Accession: MIMAT0014926
• Previous IDs: mmu-miR-344b
• Sequence: 39 - cauuuagccaaagccugacugu - 60
• Deep sequencing: 2321 reads, 37 experiments
• Evidence: experimental; Illumina [1]
• Database links:
  • RNAcentral:URS00003621F3_10090
• Predicted targets:
  • TargetScanVert:mmu-miR-344b-3p
  • miRDB:mmu-miR-344b-3p

References

1. PMID:20413612 "Mammalian microRNAs: experimental evaluation of novel and previously annotated genes" Chiang HR, Schoenfeld LW, Ruby JG, Auyeung VC, Spies N, Baek D, Johnston WK, Russ C, Luo S, Babiarz JE, Blelloch R, Schroth GP, Nusbaum C, Bartel DP Genes Dev. 24:992-1009(2010).