Stem-loop hsa-mir-3140

Accession

MI0014163

Symbol

HGNC: MIR3140

Description

Homo sapiens hsa-mir-3140 precursor miRNA mir-3140

Gene
family

RF03501; mir-3140

Sequence

584 reads, 5 reads per million, 55 experiments

ccucuugagguACCUGAAUUACCAAAAGCUUUauguauucugaaguuauugaaaauaagAGCUUUUGGGAAUUCAGGUAGUucaggagug
.((((((((.(((((((((..(((((((((((.(((.(((..........))).))))))))))))))..))))))))).))))))))..

Structure

-c        g         UA           a   a   ugaa 
  cucuugag uACCUGAAU  CCAAAAGCUUU ugu uuc    g
  |||||||| |||||||||  ||||||||||| ||| |||     
  gaggacuU AUGGACUUA  GGUUUUCGAga aua aag    u
gu        G         AG           -   a   uuau 

Annotation confidence Medium

Genome context

chr4: 152489327-152489416 [-]

Mature hsa-miR-3140-3p

• Accession: MIMAT0015008
• Description: Homo sapiens hsa-miR-3140-3p mature miRNA
• Sequence: 60 - AGCUUUUGGGAAUUCAGGUAGU - 81
• Evidence: experimental ; Illumina [1-4]

Mature hsa-miR-3140-5p

• Accession: MIMAT0019204
• Description: Homo sapiens hsa-miR-3140-5p mature miRNA
• Sequence: 12 - ACCUGAAUUACCAAAAGCUUU - 32
• Evidence: experimental ; Illumina [3-4]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 20224791
   Discovery of novel microRNAs in female reproductive tract using next generation sequencing
   Creighton CJ, Benham AL, Zhu H, Khan MF, Reid JG, Nagaraja AK, Fountain MD, Dziadek O, Han D, Ma L, Kim J, Hawkins SM, Anderson ML, Matzuk MM, Gunaratne PH
   PLoS One (2010) 5:e9637


3. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86


4. PubMed ID: 21606961
   Discovery of new microRNAs by small RNAome deep sequencing in childhood acute lymphoblastic leukemia
   "Schotte D, Akbari Moqadam F, Lange-Turenhout EA, Chen C, van Ijcken WF, Pieters R, den Boer ML"
   "Leukemia (2011) 25:1389-1399