Stem-loop hsa-mir-3179-3

Accession

MI0014221

Symbol

HGNC: MIR3179-3

Description

Homo sapiens hsa-mir-3179-3 precursor miRNA

Literature search

4 open access papers mention hsa-mir-3179-3
(6 sentences)

Sequence

908 reads, 5.0 reads per million, 96 experiments

caggaucacagacGUUUAAAUUACACUCCUUCUGCUgugccuuacagcagUAGAAGGGGUGAAAUUUAAACGUcugugauccug
((((((((((((((((((((((.(((((((((((((((........))))))))))))))).))))))))))))))))))))))

Structure

                      A               gcc 
caggaucacagacGUUUAAAUU CACUCCUUCUGCUgu   u
|||||||||||||||||||||| |||||||||||||||    
guccuagugucUGCAAAUUUAA GUGGGGAAGAUgacg   u
                      A               aca 

Annotation confidence High

Genome context

chr16: 18411894-18411977 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from hsa-mir-3179-3

Mature hsa-miR-3179-5p

• Accession: MIMAT0050575
• Description: Homo sapiens hsa-miR-3179-5p mature miRNA
• Sequence: 14 - GUUUAAAUUACACUCCUUCUGCU - 36
• Evidence: experimental ; Illumina [1-2]

Mature hsa-miR-3179-3p

• Accession: MIMAT0015056
• Description: Homo sapiens hsa-miR-3179-3p mature miRNA
• Sequence: 51 - UAGAAGGGGUGAAAUUUAAACGU - 73
• Evidence: experimental ; Illumina [1-2]

References

1. PubMed ID: 20300190
   Characterization of the Melanoma miRNAome by Deep Sequencing
   "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
   "PLoS One (2010) 5:e9685


2. PubMed ID: 21199797
   Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
   "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
   "Cancer Res (2011) 71:78-86