miRBase entry: hsa-mir-3187

Stem-loop hsa-mir-3187


Accession
MI0014231
Symbol
HGNC: MIR3187
Description
Homo sapiens hsa-mir-3187 precursor miRNA

Literature search
2 open access papers mention hsa-mir-3187
(3 sentences)

Sequence

570 reads, 26 reads per million, 51 experiments
gcuggcCCUGGGCAGCGUGUGGCUGAAGGucaccauguucuccUUGGCCAUGGGGCUGCGCGGggccagc
((((((((((.(((((.(((((((.((((............)))))))))))..))))).))))))))))

Structure
          G     -G       G    ucacc 
gcuggcCCUG GCAGC  UGUGGCU AAGG     a
|||||||||| |||||  ||||||| ||||      
cgaccggGGC CGUCG  GUACCGG UUcc     u
          G     GG       -    ucuug 


Annotation confidence High
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Genome context
chr19: 813584-813653 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from hsa-mir-3187
Name Accession Chromosome Start End Strand Confidence




Database links

Mature hsa-miR-3187-3p

Accession MIMAT0015069
Description Homo sapiens hsa-miR-3187-3p mature miRNA
Sequence 44 - UUGGCCAUGGGGCUGCGCGG - 63
Evidence experimental
Illumina [1-2]
Database links
Predicted targets

Mature hsa-miR-3187-5p

Accession MIMAT0019216
Description Homo sapiens hsa-miR-3187-5p mature miRNA
Sequence 7 - CCUGGGCAGCGUGUGGCUGAAGG - 29
Evidence experimental
Illumina [2]
Database links
Predicted targets

References

  1. PubMed ID: 20300190
    Characterization of the Melanoma miRNAome by Deep Sequencing
    "Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK"
    "PLoS One (2010) 5:e9685

  2. PubMed ID: 21199797
    Identification of new microRNAs in paired normal and tumor breast tissue suggests a dual role for the ERBB2/Her2 gene
    "Persson H, Kvist A, Rego N, Staaf J, Vallon-Christersson J, Luts L, Loman N, Jonsson G, Naya H, Hoglund M, Borg A, Rovira C"
    "Cancer Res (2011) 71:78-86