Stem-loop sequence hsa-mir-320e

Accession MI0014234
Description Homo sapiens miR-320e stem-loop
Gene family MIPF0000163; mir-320
Community annotation

This text is a summary paragraph taken from the Wikipedia entry entitled Mir-320. miRBase and Rfam are facilitating community annotation of microRNA families and entries in Wikipedia. Read more ...

In molecular biology mir-320 microRNA is a short RNA molecule. MicroRNAs function to regulate the expression levels of other genes by several mechanisms.

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Stem-loop
        uu       c     g   
gccuucuc  cccaguu uuccu ga 
||||||||  ||||||| ||||| | g
uggaagag  gggucga aaggg cu 
        uu       a     g   
Get sequence
Deep sequencing
2890 reads, 41 experiments
Genome context
Coordinates (GRCh37.p5) Overlapping transcripts
chr19: 47212550-47212602 [-]
sense
ENST00000390179 ; MIR320E-201; exon 1
ENST00000390179 ; MIR320E-201; exon 1
ENST00000291281 ; PRKD2-201; intron 3
ENST00000291281 ; PRKD2-201; intron 3
ENST00000291281 ; PRKD2-201; intron 3
ENST00000433867 ; PRKD2-202; intron 4
ENST00000433867 ; PRKD2-202; intron 4
ENST00000433867 ; PRKD2-202; intron 4
Database links

Mature sequence hsa-miR-320e

Accession MIMAT0015072
Sequence

35 - 

aaagcuggguugagaagg

 - 52

Get sequence
Deep sequencing 2888 reads, 40 experiments
Evidence experimental; SOLiD [1], Solexa [2]
Predicted targets

References

1
PMID:19784364 "Ago2 immunoprecipitation identifies predicted microRNAs in human embryonic stem cells and neural precursors" Goff LA, Davila J, Swerdel MR, Moore JC, Cohen RI, Wu H, Sun YE, Hart RP PLoS One. 4:e7192(2009).
2
PMID:20300190 "Characterization of the Melanoma miRNAome by Deep Sequencing" Stark MS, Tyagi S, Nancarrow DJ, Boyle GM, Cook AL, Whiteman DC, Parsons PG, Schmidt C, Sturm RA, Hayward NK PLoS One. 5:e9685(2010).