miRBase entry: bmo-mir-3220

Stem-loop bmo-mir-3220


Accession
MI0014273
Description
Bombyx mori bmo-mir-3220 precursor miRNA


Sequence

gcguUUCUUUCCGCGCGUGACGGUUUGGAacccaucggagguuccggguucggggcuggcggccgacucgaacuccauc
..((((...((.((.(((..((((((.((((((...(((...))))))))).))))))))))).))...))))......

Structure
----gc    CUU  C  G   GA      G      auc   g 
      guUU   UC GC CGU  CGGUUU GAaccc   gga  
      ||||   || || |||  |||||| ||||||   ||| g
      caag   ag cg gcg  gucggg cuuggg   ccu  
cuaccu    cuc  c  -   --      g      ---   u 


Annotation confidence Not enough data
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Genome context
NW_004582008.1: 856111-856189 [+]

Database links

Mature bmo-miR-3220

Accession MIMAT0015400
Description Bombyx mori bmo-miR-3220 mature miRNA
Sequence 5 - UUCUUUCCGCGCGUGACGGUUUGGA - 29
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415