miRBase entry: bmo-mir-3230

Stem-loop bmo-mir-3230


Accession
MI0014284
Description
Bombyx mori bmo-mir-3230 precursor miRNA


Sequence

1 reads, 0 reads per million, 1 experiments
augcuuggagagaaauCAGUAGUGAAAUGGGAGUCCAUGUgccgaaguuaaagaaaaaauugugucuucuaccacuucaaacugcauaucucugauaagugucacuccauacugcauucuuuuucgguac
.((((.((((((((..(((((((((.((.((((...((((((.(((((...((((...........))))...))))).....)))))))))).)).....)))))....))))..)))))))).)))).

Structure
a    u        au    ----     ----A  G    UCC      ----c     uaa    aaaa 
 ugcu ggagagaa  CAGU    AGUGA     AU GGAG   AUGUgc     gaagu   agaa    u
 |||| ||||||||  ||||    |||||     || ||||   ||||||     |||||   ||||    u
 augg uuuuucuu  guca    ucacu     ua ucuc   uauacg     cuuca   ucuu    g
c    c        ac    uacc     gugaa  g    ---      ucaaa     cca    cugu 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581785.1: 256874-257003 [-]

Database links

Mature bmo-miR-3230

Accession MIMAT0015412
Description Bombyx mori bmo-miR-3230 mature miRNA
Sequence 17 - CAGUAGUGAAAUGGGAGUCCAUGU - 40
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415