miRBase entry: bmo-mir-3254

Stem-loop bmo-mir-3254


Accession
MI0014310
Description
Bombyx mori bmo-mir-3254 precursor miRNA


Sequence

3 reads, 2 reads per million, 2 experiments
aggccggccuuguaagcuucgaacuucgcgauuauguccggacagacgucGCGGACGAACUUAAAGAAGAGcgcgcca
.(((..(((((.((((.((((...((((((((...(((......)))))))))))))))))))...))).))..))).

Structure
a   cg  -   --g    c    aac        uau   cg 
 ggc  gc cuu   uaag uucg   uucgcgau   guc  g
 |||  || |||   |||| ||||   ||||||||   |||   
 ccg  cG GAA   AUUC AAGC   AGGCGcug   cag  a
a   cg  A   GAA    -    ---        ---   ac 


Annotation confidence Not enough data
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Genome context
NW_004581794.1: 21362-21439 [+]

Database links

Mature bmo-miR-3254

Accession MIMAT0015437
Description Bombyx mori bmo-miR-3254 mature miRNA
Sequence 51 - GCGGACGAACUUAAAGAAGAG - 71
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415