miRBase entry: bmo-mir-3273

Stem-loop bmo-mir-3273


Accession
MI0014329
Description
Bombyx mori bmo-mir-3273 precursor miRNA


Sequence

251 reads, 39 reads per million, 3 experiments
uuaauugaggguauuuuuuuauugcuuagauggguggacgagcucgcagcccaucugauguuaagugguuaccggagcccguagacaucuacaacguaaaUGCCUCCACCCAUCUUAGAUAUGaguucuaaggucucagua
...(((((((.(.....(((((..((.(((((((((((.(.((.....((......((((((.(..((((.....))))..).))))))......))....)))))))))))))).))..)))))......).))))))).

Structure
uua       g -auuuu     ug  u           c a  ucgca  ccaucu      a gu    a 
   auugagg u      uuuau  cu agaugggugga g gc     gc      gauguu a  gguu c
   ||||||| |      |||||  || ||||||||||| | ||     ||      |||||| |  |||| c
   ugacucu g      gaGUA  GA UCUACCCACCU C CG     ug      cuacag u  ccga g
--a       g aaucuu     UA  U           - -  -Uaaa  caacau      a gc    g 


Annotation confidence Not enough data
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Genome context
NW_004582033.1: 4438178-4438318 [+]

Database links

Mature bmo-miR-3273

Accession MIMAT0015458
Description Bombyx mori bmo-miR-3273 mature miRNA
Sequence 101 - UGCCUCCACCCAUCUUAGAUAUG - 123
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415