miRBase entry: bmo-mir-3288

Stem-loop bmo-mir-3288


Accession
MI0014345
Description
Bombyx mori bmo-mir-3288 precursor miRNA


Sequence

2 reads, 0 reads per million, 1 experiments
uagcuugcuuugagcuuggagUAGCUUGCUUGGAGUAGCUUGCUUggagcuuggaguagcuugcuuggagguuggaguagcuuguuuggagcuuggaguagcucuugugaguucgcgcgggua
..((((((..((((((((((((.((((((((.(((.((((.((((.((.(((.(((((...))))).))).)).))))))))..))).))))...)))).)))))...))))))).)))))).

Structure
ua      uu       ---     A    ---    G   -U    U    g  g   g     g 
  gcuugc  ugagcuu   ggagU GCUU   GCUU GAG  AGCU GCUU ga cuu gagua  
  ||||||  |||||||   ||||| ||||   |||| |||  |||| |||| || ||| ||||| c
  ugggcg  gcuugag   ucucg ugag   cgag uuu  ucga ugag uu gag uucgu  
-a      -c       ugu     a    guu    g   gu    -    g  g   g     u 


Annotation confidence Not enough data
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Genome context
NW_004581696.1: 2457700-2457822 [-]

Database links

Mature bmo-miR-3288

Accession MIMAT0015475
Description Bombyx mori bmo-miR-3288 mature miRNA
Sequence 22 - UAGCUUGCUUGGAGUAGCUUGCUU - 45
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415