Stem-loop sequence bmo-mir-3288

Accession MI0014345
Description Bombyx mori miR-3288 stem-loop
Stem-loop 
ua      uu       ---     a    ---    g  -gu    u    g  g   g    a 
  gcuugc  ugagcuu   ggagu gcuu   gcuu ga   agcu gcuu ga cuu gagu g
  ||||||  |||||||   ||||| ||||   |||| ||   |||| |||| || ||| |||| c
  ugggcg  gcuugag   ucucg ugag   cgag uu   ucga ugag uu gag uucg u
-a      -c       ugu     a    guu    g  ugu    -    g  g   g    u
Get sequence
Deep sequencing
6 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf3097: 2452210-2452332 [-]
intergenic

Mature sequence bmo-miR-3288

Accession MIMAT0015475
Sequence

22 -  

uagcuugcuuggaguagcuugcuu

 - 45

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).