miRBase entry: bmo-mir-3296

Stem-loop bmo-mir-3296


Accession
MI0014353
Description
Bombyx mori bmo-mir-3296 precursor miRNA


Sequence

7 reads, 2 reads per million, 2 experiments
ugggcagauUUUUGAGUAUGCCCGCUGUACAAUUCCagucgccguuuugagguUAGCUACUCGGGAUAUGCUGUCUUUgcca
..((((((......((((((((((..((((((((.(((........))).)))).).))).)))).))))))...)))))).

Structure
ug      uUUUUG      -    CU   - -    C   ucg 
  ggcaga      AGUAUG CCCG  GUA C AAUU Cag   c
  ||||||      |||||| ||||  ||| | |||| |||    
  ccgUUU      UCGUAU GGGC  CAU G Uugg guu   c
-a      ---CUG      A    -U   C A    a   uug 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581840.1: 53444-53525 [+]

Database links

Mature bmo-miR-3296-5p

Accession MIMAT0015483
Description Bombyx mori bmo-miR-3296-5p mature miRNA
Sequence 10 - UUUUGAGUAUGCCCGCUGUACAAUUCC - 36
Evidence experimental
SOLID [1]

Mature bmo-miR-3296-3p

Accession MIMAT0015484
Description Bombyx mori bmo-miR-3296-3p mature miRNA
Sequence 54 - UAGCUACUCGGGAUAUGCUGUCUUU - 78
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415