miRBase entry: bmo-mir-3301

Stem-loop bmo-mir-3301


Accession
MI0014358
Description
Bombyx mori bmo-mir-3301 precursor miRNA


Sequence

26 reads, 3 reads per million, 3 experiments
uaaguauguguuucauuauaaauUUCGGUGAUAGUAACCCGUUGAGUuucucgccggauauucucagugggucgcgauuccaauccgauaguaaauucugcg
...(((.(.((((.(((((....((.((.(((.((.((((((((((..(.((....)).)..)))))))))).)).)))))))....))))))))).)))).

Structure
uaa   u u    c     aaau  C  U   A  A          Uu c  g 
   gua g guuu auuau    UU GG GAU GU ACCCGUUGAG  u uc c
   ||| | |||| |||||    || || ||| || ||||||||||  | ||  
   cgu c uaaa ugaua    aa cc uua cg ugggugacuc  a ag c
--g   - u    -     gccu  -  -   g  c          uu u  g 


Annotation confidence Not enough data
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Genome context
NW_004582617.1: 1268-1369 [+]

Database links

Mature bmo-miR-3301

Accession MIMAT0015489
Description Bombyx mori bmo-miR-3301 mature miRNA
Sequence 24 - UUCGGUGAUAGUAACCCGUUGAGU - 47
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415