miRBase entry: bmo-mir-3308

Stem-loop bmo-mir-3308


Accession
MI0014365
Description
Bombyx mori bmo-mir-3308 precursor miRNA


Sequence

67 reads, 24 reads per million, 3 experiments
aucaUACUUUAUCUUGGUAAUUGGUUGUCuggauuuaugaagcgaaggcggacuguuaaucaaagacgugaucuuccuuggucuuCUAGGCAAUGGGACAAAAUCAucugaaaaguggag
.((.((((((.((.((((..((.((((((((((...((.(((.(((((((..((.........)).)))...))))))).))..)))))))))).)).....))))...)))))))))).

Structure
a  a      A  --U    ---AA  G          uuu  g   c    ---   ga  guu 
 uc UACUUU UC   UGGU     UU GUUGUCugga   au aag gaag   gcg  cu   a
 || |||||| ||   ||||     || ||||||||||   || ||| ||||   |||  ||   a
 ag gugaaa ag   ACUA     GG UAACGGAUCu   ug uuc cuuc   ugc  ga   u
g  -      -  ucu    AAACA  G          -uc  g   -    uag   -a  aac 


Annotation confidence Not enough data
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Genome context
NW_004581689.1: 1810824-1810943 [-]

Database links

Mature bmo-miR-3308-5p

Accession MIMAT0015496
Description Bombyx mori bmo-miR-3308-5p mature miRNA
Sequence 5 - UACUUUAUCUUGGUAAUUGGUUGUC - 29
Evidence experimental
SOLID [1]
Database links

Mature bmo-miR-3308-3p

Accession MIMAT0015497
Description Bombyx mori bmo-miR-3308-3p mature miRNA
Sequence 86 - CUAGGCAAUGGGACAAAAUCA - 106
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415