miRBase entry: bmo-mir-3309

Stem-loop bmo-mir-3309


Accession
MI0014366
Description
Bombyx mori bmo-mir-3309 precursor miRNA


Sequence

acaauuuggagaacacuuuauaaauauucgacauaaggcuuauaggccuguaguuuucuauaauguuccuauccccuuuuuugUGUAAUAGUAUAAUUGUGCUCUUGguc
......(.((((.(((.(((((..((((..(((.((((...(((((..(((((....))))).....)))))..))))...)))..)))).)))))..))).)))).)..

Structure
acaauu g    a   -u     aa    cg   --u    cuu     ---cc     u 
      u gaga cac  uuaua  uauu  aca   aagg   auagg     uguag u
      | |||| |||  |||||  ||||  |||   ||||   |||||     |||||  
      g UUCU GUG  AAUAU  AUAA  Ugu   uucc   uaucc     auauc u
----cu G    C   UU     -G    UG   uuu    -cc     uugua     u 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
NW_004581681.1: 2366145-2366254 [-]

Database links

Mature bmo-miR-3309

Accession MIMAT0015498
Description Bombyx mori bmo-miR-3309 mature miRNA
Sequence 84 - UGUAAUAGUAUAAUUGUGCUCUUG - 107
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415