Stem-loop sequence bmo-mir-3310

Accession MI0014367
Description Bombyx mori miR-3310 stem-loop
Stem-loop 
a    ua   c   a   c   --     -uaa   --a  cc    u    -c         aa  -        a 
 gcgg  gac cgc ucc gca  gcuug    acc   gc  cucg gcca  acacggucg  gg cuuucucg u
 ||||  ||| ||| ||| |||  |||||    |||   ||  |||| ||||  |||||||||  || ||||||||  
 cguu  cug gcg agg cgu  ugaac    ugg   ug  gagc cggu  ugugccagc  cc gaaagagc g
a    ga   a   c   a   ag     cgcc   cca  uu    c    ua         -g  a        u
Get sequence
Deep sequencing
9 reads, 2 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
scaffold1977: 1355-1502 [-]
intergenic

Mature sequence bmo-miR-3310

Accession MIMAT0015499
Sequence

20 -  

gcagcuuguaaaccagccccucg

 - 42

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).