miRBase entry: bmo-mir-3315

Stem-loop bmo-mir-3315


Accession
MI0014373
Description
Bombyx mori bmo-mir-3315 precursor miRNA


Sequence

gcaccucggguugagucuaccgggauuggagauagcguuggggaaggagagcgaggaggggaucuUACUUGCCUUGGGGCUGUUCCUGUCcuggcggagcccuaggc
...(((.((((....(((.(((((((.(((.(((((.(((((((((((((.(........).)))).))).)))))).)))))))).))))))).))))))).))).

Structure
gca   c    ugag   a       u   g     g      -   -    g gag 
   ccu gggu    ucu ccgggau gga auagc uugggg aag gaga c   g
   ||| ||||    ||| ||||||| ||| ||||| |||||| ||| |||| |    
   gga cccg    agg ggucCUG CCU UGUCG GGUUCC UUC Uucu g   a
--c   u    ----   c       U   -     G      G   A    a ggg 


Annotation confidence Not enough data
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Genome context
NW_004601054.1: 39-145 [-]

Database links

Mature bmo-miR-3315

Accession MIMAT0015503
Description Bombyx mori bmo-miR-3315 mature miRNA
Sequence 66 - UACUUGCCUUGGGGCUGUUCCUGUC - 90
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415