miRBase entry: bmo-mir-3334

Stem-loop bmo-mir-3334


Accession
MI0014392
Description
Bombyx mori bmo-mir-3334 precursor miRNA


Sequence

1481 reads, 273 reads per million, 3 experiments
cguugcugcucuucuaguuucccuccacgUGAACCAGAAUGAUGGAAGGACAGggcggcaggugcucuucguccgacgacgucgauguuccuuugguuugauuguuccagguucuucaucguguagcucaaguauugcuuu
....((((......)))).......(((((((...(((((..(((((.((((((.(((.(((.((((..((((....))))..)).)).)))))).)))).)).))))).)))))))).)))).(((.........)))..

Structure
cguugcugcucuucuaguuucccuc    -   ACC     GA     G  -    g   c   u  -  uu    c 
                         cacg UGA   AGAAU  UGGAA GA CAGg cgg agg gc uc  cguc g
                         |||| |||   |||||  ||||| || |||| ||| ||| || ||  ||||  
                         gugc acu   ucuug  accuu uu guuu guu ucc ug ag  gcag a
-------uuucguuaugaacucgau    u   ---     -g     g  a    g   -   u  u  cu    c 


Annotation confidence Not enough data
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Genome context
NW_004581843.1: 95977-96117 [+]

Database links

Mature bmo-miR-3334

Accession MIMAT0015521
Description Bombyx mori bmo-miR-3334 mature miRNA
Sequence 30 - UGAACCAGAAUGAUGGAAGGACAG - 53
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415