miRBase entry: bmo-mir-3345

Stem-loop bmo-mir-3345


Accession
MI0014403
Description
Bombyx mori bmo-mir-3345 precursor miRNA


Sequence

301 reads, 96 reads per million, 3 experiments
cuaugccaauUAUCGUUACGCGCGUCGCUUAGGcgggaguggacuucgcguuguagacgacgcauccgaauucuguuugaaugcgugggaagacgaucguaggcccgga
((..(((.((.((((((.(.((((.((.((((((((((.((((....((((((....)))))).))))..)))))))))).)))))).)..)))))).)).)))..)).

Structure
-  au   a  U      -A G    U  C          -g    cuuc      u 
 cu  gcc au AUCGUU  C CGCG CG UUAGGcggga  ugga    gcguug a
 ||  ||| || ||||||  | |||| || ||||||||||  ||||    ||||||  
 gg  cgg ug uagcag  g gugc gu aguuugucuu  gccu    cgcagc g
a  cc   a  c      aa g    -  a          aa    ---a      a 


Annotation confidence Not enough data
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Genome context
NW_004582285.1: 2692-2800 [+]

Database links

Mature bmo-miR-3345

Accession MIMAT0015532
Description Bombyx mori bmo-miR-3345 mature miRNA
Sequence 11 - UAUCGUUACGCGCGUCGCUUAGG - 33
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415