Stem-loop sequence bmo-mir-2733b-2

Accession MI0014413
Description Bombyx mori miR-2733b-2 stem-loop
Gene family MIPF0000766; mir-2733
Stem-loop 
---uaa  uu -     -   g u cg          --------------  u      uu      aacgcc 
      ca  c uauca cug g g  ugaugauugu              gg agagau  ucacau      a
      ||  | ||||| ||| | |  ||||||||||              || ||||||  ||||||       
      gu  g auagu gac c c  acuacugacg              cc ucucua  agugua      c
cuuaca  uu u     u   a u au          uaaugucucucugu  -      -c      cacuac
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Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2176: 345690-345818 [-]
intergenic
Clustered miRNAs
< 10kb from bmo-mir-2733b-2
bmo-mir-9d nscaf2176: 353029-353113 [-]
bmo-mir-2733c nscaf2176: 352194-352275 [-]
bmo-mir-2733g nscaf2176: 346317-346428 [-]
bmo-mir-2733a-1 nscaf2176: 346147-346230 [-]
bmo-mir-2851-1 nscaf2176: 346140-346238 [+]
bmo-mir-2733b-2 nscaf2176: 345690-345818 [-]
bmo-mir-2733h nscaf2176: 345532-345612 [-]
bmo-mir-2733b-1 nscaf2176: 345409-345488 [-]
bmo-mir-2733a-3 nscaf2176: 345068-345215 [-]
bmo-mir-2851-2 nscaf2176: 345032-345130 [+]
bmo-mir-2733a-2 nscaf2176: 344959-345075 [-]
bmo-mir-2733f nscaf2176: 344550-344667 [-]
bmo-mir-2733i nscaf2176: 343361-343468 [-]
bmo-mir-2733e-1 nscaf2176: 341366-341463 [-]
bmo-mir-2733e-2 nscaf2176: 341036-341134 [-]

Mature sequence bmo-miR-2733b

Accession MIMAT0013777
Sequence

11 -  

ucacugggugcgugaugauugu

 - 32

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Deep sequencing 1 reads, 1 experiments
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).