miRBase entry: bmo-mir-3370

Stem-loop bmo-mir-3370


Accession
MI0014431
Description
Bombyx mori bmo-mir-3370 precursor miRNA


Sequence

ucgucagauuauagaaacagauuuaucagcaacaugcuuugucaacuguacaauacuuacuuucagcugcaagcguugucagcauuuuguaauuguaUACUUGUACAAUGUCUUGAAACGUcuugcuaaaaucugaa
...(((((((.(((....((((...((((..((((....((((((.((((((((...(((.....(((((((...))).)))).....))))))))))).))).))))))).))))...))))..))).))))))).

Structure
ucg       a   aaac    uua    ca    gcuu   -   c        acu   uuuca    -   g 
   ucagauu uag    agau   ucag  acau    ugu caa uguacaau   uac     gcug caa  
   ||||||| |||    ||||   ||||  ||||    ||| ||| ||||||||   |||     |||| ||| c
   agucuaa auc    ucUG   AGUU  UGUA    ACA GUU AUauguua   aug     cgac guu  
--a       a   --gu    CAA    -C    ----   U   C        ---   uuuua    u   g 


Annotation confidence Not enough data
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Genome context
NW_004582020.1: 2076049-2076185 [+]

Database links

Mature bmo-miR-3370

Accession MIMAT0015557
Description Bombyx mori bmo-miR-3370 mature miRNA
Sequence 98 - UACUUGUACAAUGUCUUGAAACGU - 121
Evidence experimental
SOLID [1]

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415