miRBase entry: bmo-mir-3399

Stem-loop bmo-mir-3399


Accession
MI0014462
Description
Bombyx mori bmo-mir-3399 precursor miRNA


Sequence

80 reads, 22 reads per million, 3 experiments
uuucaaUAUCUACAUUGAAUACCUGGCUAUGaggcguugucucgaccugggucucgcuggaugugcuugguucuguauauauucgac
..(((((((.((((..((..(((.((((((..((((..(.(((.....))).).))))..))).))).))))))))).))))).)).

Structure
uu  -     C    UU  AU   U   -   Ga    uu u   g 
  uc aaUAU UACA  GA  ACC GGC UAU  ggcg  g cuc a
  || ||||| ||||  ||  ||| ||| |||  ||||  | ||| c
  ag uuaua augu  cu  ugg ucg gua  ucgc  c ggg c
-c  c     u    --  --   u   u   gg    -u u   u 


Annotation confidence Not enough data
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Genome context
NW_004581840.1: 8243-8329 [-]

Database links

Mature bmo-miR-3399

Accession MIMAT0015603
Description Bombyx mori bmo-miR-3399 mature miRNA
Sequence 7 - UAUCUACAUUGAAUACCUGGCUAUG - 31
Evidence experimental
SOLID [1]
Database links

References

  1. PubMed ID: 20229201
    Novel microRNAs in silkworm (Bombyx mori)
    "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
    "Funct Integr Genomics (2010) 10:405-415