Stem-loop bmo-mir-3424

Accession

MI0014489

Description

Bombyx mori bmo-mir-3424 precursor miRNA

Sequence

10 reads, 4 reads per million, 2 experiments

gucuggcuugguaguuccauuauaaccucagUCAUAUGUAGUAUUUUACCUAUGUuuuguugcccuuguagacagacgagcuggugaguaguuacugucgcuguggauauuaacaaugccacgggcauggcc
(((..((((((((........(((.((.((((.(((.((((...((((((..(..((((((.........))))))..)...))))))...))))))).)))).)).)))......)))))..)))..))).

Structure

-   ug   --     guuccauu   a  u    C   U    UAU      -UA GU      gcc 
 guc  gcu  uggua        aua cc cagU AUA GUAG   UUUACC   U  uuuguu   c
 |||  |||  |||||        ||| || |||| ||| ||||   ||||||   |  ||||||   u
 cgg  cgg  accgu        uau gg gucg ugu cauu   gagugg   a  agacag   u
c   ua   gc     --aacaau   a  u    c   -    gau      ucg gc      aug 

Annotation confidence Not enough data

Genome context

NW_004581792.1: 146859-146990 [+]

Mature bmo-miR-3424

• Accession: MIMAT0015632
• Description: Bombyx mori bmo-miR-3424 mature miRNA
• Sequence: 32 - UCAUAUGUAGUAUUUUACCUAUGU - 55
• Evidence: experimental ; SOLID [1]

References

1. PubMed ID: 20229201
   Novel microRNAs in silkworm (Bombyx mori)
   "Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J"
   "Funct Integr Genomics (2010) 10:405-415