Stem-loop sequence bmo-mir-3424

Accession MI0014489
Description Bombyx mori miR-3424 stem-loop
Stem-loop 
-   -  g  -     guuccauu   a  u    c   u    uau      --ua     ug    c 
 guc ug cu uggua        aua cc cagu aua guag   uuuacc    uguuu  uugc c
 ||| || || |||||        ||| || |||| ||| ||||   ||||||    |||||  ||||  
 cgg ac gg accgu        uau gg gucg ugu cauu   gagugg    gcaga  gaug u
c   u  g  c     --aacaau   a  u    c   -    gau      ucga     ca    u
Get sequence
Deep sequencing
20 reads, 3 experiments
Genome context
Coordinates (SILKDB2.0) Overlapping transcripts
nscaf2830: 146679-146810 [+]
intergenic

Mature sequence bmo-miR-3424

Accession MIMAT0015632
Sequence

32 -  

ucauauguaguauuuuaccuaugu

 - 55

Get sequence
Evidence experimental; SOLID [1]

References

1
PMID:20229201 "Novel microRNAs in silkworm (Bombyx mori)" Cai Y, Yu X, Zhou Q, Yu C, Hu H, Liu J, Lin H, Yang J, Zhang B, Cui P, Hu S, Yu J Funct Integr Genomics. 10:405-415(2010).