Accession
MI0014540
Description
Arabidopsis lyrata
aly-MIR167b precursor miRNA
Gene family
MIPF0000023;
MIR167_1
Sequence
2865
reads,
99895
reads per million, 1 experiments
aucugcacaacuuguugcucagguauuuugaagacaaguccacaagggaacaagUGAAGCUGCCAGCAUGAUCUAucuuugguuaagagaugaauguguaaacauauugcuuaaacccaagcuaGGUCAUGCUCUGACAGCCUCACUccuuccugguuuaggaccauucacugauaaagcauuccacaugccgau
(((.(((.....((((..((((......((((.....((((((..(((((..(((((.(((((.(((((((((((.(((.(((((((.(((..((((....))))))).))).)))).))).)))))))))))..).)))).)))))..))))).))...))))..))))))))...)))).......))).)))
(((.(((.....((((..((((......((((.....((((((..(((((..(((((.(((((.(((((((((((.(((.(((((((.(((..((((....))))))).))).)))).))).)))))))))))..).)))).)))))..))))).))...))))..))))))))...)))).......))).)))
Structure
u --caacu -gc guauuu gacaa --- aa ca A - -C u u - a ga g auc gca uguu ucag ugaa gucc ac gggaa agUGA GCUG C AGCAUGAUCUA cuu gguu aag gau augu u ||| ||| |||| |||| |||| |||| || ||||| ||||| |||| | ||||||||||| ||| |||| ||| ||| |||| uag cgu acga aguc acuu cagg ug uccuu UCACU CGAC G UCGUACUGGau gaa ccaa uuc uua uaca a c acaccuu aau ------ ---ac auu -g cc C A UC c c a g -- a
Annotation confidence
Not enough data
Do you think this miRNA is real?
Genome context
GL348717.1: 21158356-21158550 [+]
Database links
Mature aly-miR167b-5p
| Accession | MIMAT0017475 |
| Description | Arabidopsis lyrata aly-miR167b-5p mature miRNA |
| Sequence | 55 - UGAAGCUGCCAGCAUGAUCUA - 75 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
| Database links |
|
Mature aly-miR167b-3p
| Accession | MIMAT0017476 |
| Description | Arabidopsis lyrata aly-miR167b-3p mature miRNA |
| Sequence | 125 - GGUCAUGCUCUGACAGCCUCACU - 147 |
| Evidence |
experimental
Illumina [1], SOLiD [2] |
References
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