Stem-loop esi-MIR3460

Accession

MI0014679

Description

Ectocarpus siliculosus esi-MIR3460 precursor miRNA

Sequence

acuuacgauguaaGGGAAUCUGCAGCUUGUGAGGugcugcagaaaaccccccaggcgcuggguuuuucuucugccgcaccUCACGAGCUGCAGGUUCCCUUacaucgcaag
.(((.((((((((((((((((((((((((((((((((.((((((.....(((((...)))))......)))))).)))))))))))))))))))))))))))))))).)))

Structure

a   a                                u      -aaccc     g 
 cuu cgauguaaGGGAAUCUGCAGCUUGUGAGGugc gcagaa      cccag  
 ||| |||||||||||||||||||||||||||||||| ||||||      ||||| c
 gaa gcuacaUUCCCUUGGACGUCGAGCACUccacg cgucuu      ggguc  
-   c                                c      cuuuuu     g 

Annotation confidence Not enough data

Genome context

Unknown

Mature esi-miR3460-5p

• Accession: MIMAT0017761
• Description: Ectocarpus siliculosus esi-miR3460-5p mature miRNA
• Sequence: 14 - GGGAAUCUGCAGCUUGUGAGG - 34
• Evidence: experimental ; Illumina [1]

Mature esi-miR3460-3p

• Accession: MIMAT0017762
• Description: Ectocarpus siliculosus esi-miR3460-3p mature miRNA
• Sequence: 81 - UCACGAGCUGCAGGUUCCCUU - 101
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621