Stem-loop esi-MIR3463

Accession

MI0014682

Description

Ectocarpus siliculosus esi-MIR3463 precursor miRNA

Sequence

gcgcgacgUCAUUGCUGGUGCUCGUUGGAggcgaagccuugguggccaggUGCAGCGGGCUCAGGAAGGGGcucagca
((..((.(((.((.((((.((((((((...((...(((.....)))...)).)))))))))))).))..))))).)).

Structure

-  gc  c   -A  G    U        GAg  gaa   u 
 gc  ga gUC  UU CUGG GCUCGUUG   gc   gcc u
 ||  || |||  || |||| ||||||||   ||   ||| g
 cg  cu cGG  AA GACU CGGGCGAC   Ug   cgg g
a  -a  -   GG  G    -        --G  gac   u 

Annotation confidence Not enough data

Genome context

sctg_464: 51882-51959 [-]

Mature esi-miR3463-5p

• Accession: MIMAT0017767
• Description: Ectocarpus siliculosus esi-miR3463-5p mature miRNA
• Sequence: 9 - UCAUUGCUGGUGCUCGUUGGA - 29
• Evidence: experimental ; Illumina [1]

Mature esi-miR3463-3p

• Accession: MIMAT0017768
• Description: Ectocarpus siliculosus esi-miR3463-3p mature miRNA
• Sequence: 51 - UGCAGCGGGCUCAGGAAGGGG - 71
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621