Stem-loop esi-MIR3457

Accession

MI0014684

Description

Ectocarpus siliculosus esi-MIR3457 precursor miRNA

Sequence

cgguguugcUGAAUGCCAGGACAAGCUAAAcgaauaaacuucgaguuuggcauucgcgcacugcuuggcguugaggucaaaccgugcgcgaaugucaaacucgaaguguauucgcuUAGCUUGUCCUGGGAUUCCGUagcaucu
.((((((((.((((.((((((((((((((.((((((.((((((((((((((((((((((((.(.(((((......))))).).)))))))))))))))))))))))).)))))).)))))))))))))).)))).)))))))).

Structure

c        U    G              A      a                        u c     gu 
 gguguugc GAAU CCAGGACAAGCUAA cgaaua acuucgaguuuggcauucgcgcac g uuggc  u
 |||||||| |||| |||||||||||||| |||||| |||||||||||||||||||||||| | |||||   
 cuacgaUG CUUA GGUCCUGUUCGAUu gcuuau ugaagcucaaacuguaagcgcgug c aacug  g
u        C    G              c      g                        c a     ga 

Annotation confidence Not enough data

Genome context

sctg_186: 89960-90103 [+]

Mature esi-miR3457-5p

• Accession: MIMAT0017771
• Description: Ectocarpus siliculosus esi-miR3457-5p mature miRNA
• Sequence: 10 - UGAAUGCCAGGACAAGCUAAA - 30
• Evidence: experimental ; Illumina [1]

Mature esi-miR3457-3p

• Accession: MIMAT0017772
• Description: Ectocarpus siliculosus esi-miR3457-3p mature miRNA
• Sequence: 117 - UAGCUUGUCCUGGGAUUCCGU - 137
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621