Stem-loop esi-MIR3467

Accession

MI0014685

Description

Ectocarpus siliculosus esi-MIR3467 precursor miRNA

Sequence

gcggacgccuucaagggccacgggaugcUGCGGCGAGCCAAGACCAUAgucaaggguaugucccgccgcgccgcgcugcggggauacccuugacUACGGUCUUGGCUCGCCGCAGcauccccuggcccuugaaggcguccgca
((((((((((((((((((((.((((((((((((((((((((((((.(((((((((((((.((((((.(((...))).))))))))))))))))))).)))))))))))))))))))))))).)))))))))))))))))))).

Structure

-                    c                        A             g      c   c 
 gcggacgccuucaagggcca gggaugcUGCGGCGAGCCAAGACC UAgucaaggguau ucccgc gcg  
 |||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||| ||| c
 cgccugcggaaguucccggu cccuacGACGCCGCUCGGUUCUGG AUcaguucccaua ggggcg cgc  
a                    c                        C             -      u   g 

Annotation confidence Not enough data

Genome context

sctg_759: 7482-7624 [+]

Mature esi-miR3467-5p

• Accession: MIMAT0017773
• Description: Ectocarpus siliculosus esi-miR3467-5p mature miRNA
• Sequence: 29 - UGCGGCGAGCCAAGACCAUA - 48
• Evidence: experimental ; Illumina [1]

Mature esi-miR3467-3p

• Accession: MIMAT0017774
• Description: Ectocarpus siliculosus esi-miR3467-3p mature miRNA
• Sequence: 95 - UACGGUCUUGGCUCGCCGCAG - 115
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621