Stem-loop esi-MIR3459

Accession

MI0014686

Description

Ectocarpus siliculosus esi-MIR3459 precursor miRNA

Sequence

ggucugUCCGGAGGUCCCCUUGUUGCUUgaaugcaagccaagcuggcucuccgauagcgucgacgaauaucuucgcuugcgUUCAAGAACCAAGCGGACCUCcgcgcagaccc
(((((((.(((((((((.((((...(((((((((((((.(((.((..((..((((...))))..)).)).))).)))))))))))))...)))).))))))))).))))))).

Structure

-       C         C    UUG             c   c  gc  uc    a 
 ggucugU CGGAGGUCC CUUG   CUUgaaugcaagc aag ug  uc  cgau  
 ||||||| ||||||||| ||||   ||||||||||||| ||| ||  ||  |||| g
 ccagacg gcCUCCAGG GAAC   GAACUUgcguucg uuc au  ag  gcug  
c       c         C    CAA             c   u  -a  ca    c 

Annotation confidence Not enough data

Genome context

sctg_270: 210232-210344 [-]

Mature esi-miR3459-5p

• Accession: MIMAT0017775
• Description: Ectocarpus siliculosus esi-miR3459-5p mature miRNA
• Sequence: 7 - UCCGGAGGUCCCCUUGUUGCUU - 28
• Evidence: experimental ; Illumina [1]

Mature esi-miR3459-3p

• Accession: MIMAT0017776
• Description: Ectocarpus siliculosus esi-miR3459-3p mature miRNA
• Sequence: 82 - UUCAAGAACCAAGCGGACCUC - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621