Stem-loop esi-MIR3452

Accession

MI0014692

Description

Ectocarpus siliculosus esi-MIR3452 precursor miRNA

Sequence

UACAUAGACCAGUUCGGACGGcgguguaguacgcuuccgaaaacgggagcaaggcuagcuccUUCCGCUGGAUGUCCAUGU
.((((.(((..((((((.(((.((.(((((..(((((((....)))))))...))).)).))..)))))))))))).))))

Structure

U    A   CA      A   -c  u  -   -ac       a 
 ACAU GAC  GUUCGG CGG  gg gu agu   gcuuccg a
 |||| |||  |||||| |||  || || |||   |||||||  
 UGUA CUG  UAGGUC GCC  cc cg ucg   cgagggc a
-    C   --      -   UU  u  a   gaa       a 

Annotation confidence Not enough data

Genome context

sctg_15: 395048-395128 [+]

Mature esi-miR3452-5p

• Accession: MIMAT0017787
• Description: Ectocarpus siliculosus esi-miR3452-5p mature miRNA
• Sequence: 1 - UACAUAGACCAGUUCGGACGG - 21
• Evidence: experimental ; Illumina [1]

Mature esi-miR3452-3p

• Accession: MIMAT0017788
• Description: Ectocarpus siliculosus esi-miR3452-3p mature miRNA
• Sequence: 63 - UUCCGCUGGAUGUCCAUGU - 81
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 20520714
   The Ectocarpus genome and the independent evolution of multicellularity in brown algae
   "Cock JM, Sterck L, Rouze P, Scornet D, Allen AE, Amoutzias G, Anthouard V, Artiguenave F, Aury JM, Badger JH, Beszteri B, Billiau K, Bonnet E, Bothwell JH, Bowler C, Boyen C, Brownlee C, Carrano CJ, Charrier B, Cho GY, Coelho SM, Collen J, Corre E, Da Sil"
   "Nature (2010) 465:617-621