miRBase entry: nvi-mir-283

Stem-loop nvi-mir-283


Accession
MI0014730
Description
Nasonia vitripennis nvi-mir-283 precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

ugcuguccagucacguagucAAAUAUCAGCUGGUAAUUCUgggauacuuauuaugcagcccaggauucuugcugguauccgguuacgaacuggcucgucgcc
....(.(((((..(((((((..((((((((.((.(((((((((...(.......)...))))))))))).))))))))..))))))).))))))........

Structure
----ugcu u     ca       AA        U  U         aua uu 
        g ccagu  cguaguc  AUAUCAGC GG AAUUCUggg   c  a
        | |||||  |||||||  |||||||| || |||||||||   |  u
        c gguca  gcauugg  uauggucg uc uuaggaccc   g  u
ccgcugcu -     -a       cc        u  -         gac ua 


Annotation confidence Not enough data
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Genome context
GL340882.1: 829662-829763 [+]
Clustered miRNAs
2 other miRNAs are < 10 kb from nvi-mir-283
Name Accession Chromosome Start End Strand Confidence




Database links

Mature nvi-miR-283

Accession MIMAT0015669
Description Nasonia vitripennis nvi-miR-283 mature miRNA
Sequence 21 - AAAUAUCAGCUGGUAAUUCU - 40
Evidence not_experimental

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348