Stem-loop nvi-mir-219

Accession

MI0014751

Description

Nasonia vitripennis nvi-mir-219 precursor miRNA

Gene family

MIPF0000044; mir-219

Sequence

ucggcguugucucgggcuaUGAUUGUCCAAACGCAAUUCUUGucugugccuugagauaccaagaauuguguggggacaucagcgcucggagcgcggaucaac
((.((((..((.(((((..((((.((((..(((((((((((((((........)))...))))))))))))..))))))))..))))))))))).)).....

Structure

-----  g    ug  u     ua    U    AA            ---   gug 
     uc gcgu  uc cgggc  UGAU GUCC  ACGCAAUUCUUG   ucu   c
     || ||||  || |||||  |||| ||||  ||||||||||||   |||    
     ag cgcg  ag gcucg  acua cagg  uguguuaagaac   aga   c
caacu  g    --  -     cg    -    gg            cau   guu 

Annotation confidence Not enough data

Genome context

chr1: 13994355-13994456 [+]

Mature nvi-miR-219

• Accession: MIMAT0015690
• Description: Nasonia vitripennis nvi-miR-219 mature miRNA
• Sequence: 20 - UGAUUGUCCAAACGCAAUUCUUG - 42
• Evidence: not_experimental

References

1. PubMed ID: 20075255
   Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
   "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
   "Science (2010) 327:343-348