miRBase entry: nvi-mir-9a

Stem-loop nvi-mir-9a


Accession
MI0014758
Description
Nasonia vitripennis nvi-mir-9a precursor miRNA
Gene family
MIPF0000014; mir-9


Sequence

uggcgcggacauuuUCUUUGGUUAUCUAGCUGUAUGAguuugguuguacaucauaaagcuagguuaccggaguugagauccucgcca
(((((.(((..((..(((((((.((((((((.(((((((........)).))))).)))))))).)))))))..))..))).)))))

Structure
     c   ca  uU       U        G     -  uug 
uggcg gga  uu  CUUUGGU AUCUAGCU UAUGA gu   g
||||| |||  ||  ||||||| |||||||| ||||| ||    
accgc ccu  ag  gaggcca uggaucga auacu ca   u
     u   ag  uu       u        a     a  ugu 


Annotation confidence Not enough data
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Genome context
chr3: 7543084-7543170 [+]

Database links

Mature nvi-miR-9a

Accession MIMAT0015697
Description Nasonia vitripennis nvi-miR-9a mature miRNA
Sequence 15 - UCUUUGGUUAUCUAGCUGUAUGA - 37
Evidence experimental
454 [1]

References

  1. PubMed ID: 20075255
    Functional and evolutionary insights from the genomes of three parasitoid Nasonia species
    "Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Werren JH, Richards S, Desjardins CA, Niehuis O, Gadau J, Colbourne JK, Beukeboom LW, Desplan C, Elsik CG, Grimmelikhuijzen CJ, Kitts P, Lynch JA, Murphy T, Oliveira DC, Smith CD, van"
    "Science (2010) 327:343-348