miRBase entry: ppy-mir-1-1

Stem-loop ppy-mir-1-1


Accession
MI0014778
Description
Pongo pygmaeus ppy-mir-1-1 precursor miRNA
Gene family
MIPF0000038; mir-1


Sequence

ugggaaacauacuucuuuauaugcccauauggaccugcuaagcuaUGGAAUGUAAAGAAGUAUGUAUcuca
(((((.((((((((((((((((..((((((((.....)))...))))).)))))))))))))))).)))))

Structure
     a                gc     ---   a 
uggga acauacuucuuuauau  ccaua   ugg c
||||| ||||||||||||||||  |||||   ||| c
acucU UGUAUGAAGAAAUGUA  GGUau   auc u
     A                -A     cga   g 


Annotation confidence Not enough data
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Genome context
chr20: 60885111-60885181 [+]

Database links

Mature ppy-miR-1

Accession MIMAT0015720
Description Pongo pygmaeus ppy-miR-1 mature miRNA
Sequence 46 - UGGAAUGUAAAGAAGUAUGUAU - 67
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64