miRBase entry: ppy-let-7a-2

Stem-loop ppy-let-7a-2


Accession
MI0014780
Description
Pongo pygmaeus ppy-let-7a-2 precursor miRNA
Gene family
MIPF0000002; let-7

Literature search
2 open access papers mention ppy-let-7a-2
(5 sentences)

Sequence

agguUGAGGUAGUAGGUUGUAUAGUUuagaauuacaucaagggagauaacuguacagccuccuagcuuuccu
(((..(((.(((.(((((((((((((.........(((......)))))))))))))))).))).))).)))

Structure
   uU   G   U             uagaauuac   aa 
agg  GAG UAG AGGUUGUAUAGUU         auc  g
|||  ||| ||| |||||||||||||         |||   
ucc  uuc auc uccgacaugucaa         uag  g
   -u   g   c             ---------   ag 


Annotation confidence Not enough data
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Genome context
chr11: 119102471-119102542 [-]
Clustered miRNAs
1 other miRNA is < 10 kb from ppy-let-7a-2
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-let-7a

Accession MIMAT0015721
Description Pongo pygmaeus ppy-let-7a mature miRNA
Sequence 5 - UGAGGUAGUAGGUUGUAUAGUU - 26
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64