Stem-loop ppy-mir-30e

Accession

MI0014805

Description

Pongo pygmaeus ppy-mir-30e precursor miRNA

Gene family

MIPF0000005; mir-30

Sequence

gggcagucuuugcuacUGUAAACAUCCUUGACUGGAAGcuguaagguguucagaggagcuuucagucggauguuuacagcggcaggcugcca
.((((((((..(((.((((((((((((..(((((((((((.(...(....)...).))))))))))))))))))))))).))))))))))).

Structure

g        uu   a            UU           g aag u 
 ggcagucu  gcu cUGUAAACAUCC  GACUGGAAGcu u   g g
 ||||||||  ||| ||||||||||||  ||||||||||| |   |  
 ccgucgga  cgg gacauuuguagg  cugacuuucga g   c u
a        --   c            --           g aga u 

Annotation confidence Not enough data

Genome context

chr1: 189333513-189333604 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-30e

Mature ppy-miR-30e

• Accession: MIMAT0015739
• Description: Pongo pygmaeus ppy-miR-30e mature miRNA
• Sequence: 17 - UGUAAACAUCCUUGACUGGAAG - 38
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64