miRBase entry: ppy-mir-33b

Stem-loop ppy-mir-33b


Accession
MI0014806
Description
Pongo pygmaeus ppy-mir-33b precursor miRNA
Gene family
MIPF0000070; mir-33


Sequence

gcgaggcggcgcccgcGUGCAUGCUGUUGCAUGCACguguugagcggugcagugccucggcagugcagcccggagccggccccuggcacc
((.(((.((((((((.((((((((((..((((((((((.....)).))))).)))..))))).)))).).))).))..)))))).))...

Structure
---  g   c   --  -   c -    -     UU   -     -  g 
   gc agg ggc  gc ccg G UGCA UGCUG  GCA UGCAC gu u
   || ||| |||  || ||| | |||| |||||  ||| ||||| || u
   cg ucc ccg  cg ggc c acgu acggc  cgu acgug cg g
cca  g   -   gc  a   c g    g     uc   g     g  a 


Annotation confidence Not enough data
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Genome context
chr17: 18161891-18161980 [-]

Database links

Mature ppy-miR-33b

Accession MIMAT0015740
Description Pongo pygmaeus ppy-miR-33b mature miRNA
Sequence 17 - GUGCAUGCUGUUGCAUGCAC - 36
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64