miRBase entry: ppy-mir-96

Stem-loop ppy-mir-96


Accession
MI0014810
Description
Pongo pygmaeus ppy-mir-96 precursor miRNA
Gene family
MIPF0000072; mir-96


Sequence

uggccgauUUUGGCACUAGCACAUUUUUGCUugugucucuccgcucugagcaaucaugugcagugccaauaugggaaa
...((.((.((((((((.((((((..(((((((((......)))...))))))..)))))))))))))).)).))...

Structure
ugg  g  U        A      UU      ---   uc 
   cc au UUGGCACU GCACAU  UUGCUu   gug  u
   || || |||||||| ||||||  ||||||   |||   
   gg ua aaccguga cgugua  aacgag   cgc  c
aaa  g  u        -      cu      ucu   cu 


Annotation confidence Not enough data
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Genome context
chr7: 126690695-126690772 [-]
Clustered miRNAs
2 other miRNAs are < 10 kb from ppy-mir-96
Name Accession Chromosome Start End Strand Confidence




Database links

Mature ppy-miR-96

Accession MIMAT0015745
Description Pongo pygmaeus ppy-miR-96 mature miRNA
Sequence 9 - UUUGGCACUAGCACAUUUUUGCU - 31
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64