miRBase entry: ppy-mir-133c

Stem-loop ppy-mir-133c


Accession
MI0014825
Description
Pongo pygmaeus ppy-mir-133c precursor miRNA
Gene family
MIPF0000029; mir-133


Sequence

gggagccaaaugcuuugcuagagcugguaaaauggaaccaaaucgacuguccaauggaUUUGGUCCCCUUCAACCAGCUGuagcugugcauugauggcgccg
.((.(((((((((...((((.(((((((..((.((.((((((((.(........).)))))))).)).))..))))))).))))...)))))..)))).)).

Structure
g  a    --     uuu    g       aa  u  a        g cug 
 gg gcca  aaugc   gcua agcuggu  aa gg accaaauc a   u
 || ||||  |||||   |||| |||||||  || || |||||||| |    
 cc cggu  uuacg   cgau UCGACCA  UU CC UGGUUUag u   c
g  g    ag     ugu    G       AC  C  C        g aac 


Annotation confidence Not enough data
Do you think this miRNA is real?

Genome context
chr20: 60896506-60896607 [+]

Database links

Mature ppy-miR-133c

Accession MIMAT0016973
Description Pongo pygmaeus ppy-miR-133c mature miRNA
Sequence 59 - UUUGGUCCCCUUCAACCAGCUG - 80
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64