miRBase entry: ppy-mir-135a-1

Stem-loop ppy-mir-135a-1


Accession
MI0014827
Description
Pongo pygmaeus ppy-mir-135a-1 precursor miRNA
Gene family
MIPF0000028; mir-135


Sequence

aggccucgcuguucucUAUGGCUUUUUAUUCCUAUGUGAuucuacugcucacucauauagggauuggagccguggcgcacggcggggaca
...(((((((((.(.((((((((((..((((((((((((.............)))))))))))).)))))))))).).)))))))))...

Structure
agg         u u          UU            uucua 
   ccucgcugu c cUAUGGCUUU  AUUCCUAUGUGA     c
   ||||||||| | ||||||||||  ||||||||||||     u
   ggggcggca g ggugccgagg  uagggauauacu     g
aca         c c          -u            cacuc 


Annotation confidence Not enough data
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Genome context
chr3: 94055868-94055957 [+]

Database links

Mature ppy-miR-135a

Accession MIMAT0015757
Description Pongo pygmaeus ppy-miR-135a mature miRNA
Sequence 17 - UAUGGCUUUUUAUUCCUAUGUGA - 39
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64