Stem-loop ppy-mir-142

Accession

MI0014833

Description

Pongo pygmaeus ppy-mir-142 precursor miRNA

Gene family

MIPF0000084; mir-142

Sequence

gacagugcagucaccCAUAAAGUAGAAAGCACUACUaacagcacuggagggUGUAGUGUUUCCUACUUUAUGGAugaguguacugug
.((((((((.(((.(((((((((((.(((((((((...(..(....)..)..))))))))).))))))))))).))).)))))))).

Structure

g        g   c           A         Uaa ag a 
 acagugca uca cCAUAAAGUAG AAGCACUAC   c  c c
 |||||||| ||| ||||||||||| |||||||||   |  |  
 ugucaugu agu GGUAUUUCAUC UUUGUGAUG   g  g u
g        g   A           C         -Ug ga g 

Annotation confidence Not enough data

Genome context

chr17: 33814033-33814119 [+]

Mature ppy-miR-142-5p

• Accession: MIMAT0015765
• Description: Pongo pygmaeus ppy-miR-142-5p mature miRNA
• Sequence: 16 - CAUAAAGUAGAAAGCACUACU - 36
• Evidence: not_experimental

Mature ppy-miR-142-3p

• Accession: MIMAT0015766
• Description: Pongo pygmaeus ppy-miR-142-3p mature miRNA
• Sequence: 52 - UGUAGUGUUUCCUACUUUAUGGA - 74
• Evidence: not_experimental

References

1. PubMed ID: 20214803
   Genome-wide comparative analysis of microRNAs in three non-human primates
   Brameier M
   BMC Res Notes (2010) 3:64