miRBase entry: ppy-mir-181a-2

Stem-loop ppy-mir-181a-2

Accession

MI0014844

Description

Pongo pygmaeus ppy-mir-181a-2 precursor miRNA

Gene family

MIPF0000007; mir-181

Sequence

agaagggcuaucaggccagccuucagaggacuccaaggAACAUUCAACGCUGUCGGUGAGUuugggauuugaaaaaaccacugaccguugacuguaccuugggguccuua
.((((((((....)))...))))).(((((((((((((.(((.((((((..(((((((.((((...........))))))))))))))))).))).))))))))))))).

Structure

agaagggcuaucaggccagccuuca             A   U      CU       A    ggga 
                         gaggacuccaagg ACA UCAACG  GUCGGUG GUuu    u
                         ||||||||||||| ||| ||||||  ||||||| ||||    u
                         uuccugggguucc ugu aguugc  cagucac caaa    u
------------------------a             a   c      --       -    aaag

Annotation confidence Not enough data

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Genome context

chr9: 121588113-121588222 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-181a-2

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-181a-5p

Accession	MIMAT0002626
Description	Pongo pygmaeus ppy-miR-181a-5p mature miRNA
Sequence	39 - AACAUUCAACGCUGUCGGUGAGU - 61
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64