miRBase entry: ppy-mir-193b

Stem-loop ppy-mir-193b

Accession

MI0014856

Description

Pongo pygmaeus ppy-mir-193b precursor miRNA

Gene family

MIPF0000082; mir-193

Sequence

guggucucagaaucgggguuuugagggcgagaugaguuuauguuuuauccAACUGGCCCUCAAAGUCCCGCUuuuggggucau
((((((((((((.(((((((((((((((.((.((.((.........)).)).)).))))))))))))))).))))))))))))

Structure

            u               g  a  a  uua 
guggucucagaa cgggguuuugagggc ag ug gu   u
|||||||||||| ||||||||||||||| || || ||   g
uacugggguuuU GCCCUGAAACUCCCG UC Ac ua   u
            C               G  A  c  uuu

Annotation confidence Not enough data

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Genome context

chr16: 14771132-14771214 [+]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-193b

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-193b

Accession	MIMAT0015789
Description	Pongo pygmaeus ppy-miR-193b mature miRNA
Sequence	51 - AACUGGCCCUCAAAGUCCCGCU - 72
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64