miRBase entry: ppy-mir-210

Stem-loop ppy-mir-210


Accession
MI0014866
Description
Pongo pygmaeus ppy-mir-210 precursor miRNA
Gene family
MIPF0000086; mir-210


Sequence

acccgggcagucuccuccaggcgcagggccagccccugccccaccgcacacugcgcugcccccaagaccacacgUGUGCCGUGUGACAGCGGCUGAucugugccugaggcagcgcgaccc
....(((..((((((((.(((((((((..(((((.(((.(.(((.((((((((.(((.......))..).)).)))))).))).).))).))))).))))))))))))).)).))..)))

Structure
accc   ca  -  -    c         gc     c   c c   c      -  c --  gc 
    ggg  gu cu ccuc aggcgcagg  cagcc cug c cac gcacac ug g  cu  c
    |||  || || |||| |||||||||  ||||| ||| | ||| |||||| || |  ||  c
    ccc  cg ga ggag uccgugucu  GUCGG GAC G GUG CGUGUg ac c  ga  c
----   ag  c  c    -         -A     C   A U   C      c  a ca  ac 


Annotation confidence Not enough data
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Genome context
chr11: 335370-335489 [-]

Database links

Mature ppy-miR-210

Accession MIMAT0015801
Description Pongo pygmaeus ppy-miR-210 mature miRNA
Sequence 75 - UGUGCCGUGUGACAGCGGCUGA - 96
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64