miRBase entry: ppy-mir-216b

Stem-loop ppy-mir-216b


Accession
MI0014867
Description
Pongo pygmaeus ppy-mir-216b precursor miRNA
Gene family
MIPF0000054; mir-216


Sequence

gcagacuggaAAAUCUCUGCAGGCAAAUGUGAugucacugaagaaaucacacacuuacccguagagauucuacagucugaca
.(((((((...(((((((((.((.((.((((((.((......)).))))))...)).)).)))))))))...)))))))...

Structure
--g       gaA         A  C  --A      g  ac 
   cagacug   AAUCUCUGC GG AA   UGUGAu uc  u
   |||||||   ||||||||| || ||   |||||| ||   
   gucugac   uuagagaug cc uu   acacua ag  g
aca       auc         c  a  cac      a  aa 


Annotation confidence Not enough data
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Genome context
chr2A: 55007325-55007406 [+]

Database links

Mature ppy-miR-216b

Accession MIMAT0015802
Description Pongo pygmaeus ppy-miR-216b mature miRNA
Sequence 11 - AAAUCUCUGCAGGCAAAUGUGA - 32
Evidence not_experimental

References

  1. PubMed ID: 20214803
    Genome-wide comparative analysis of microRNAs in three non-human primates
    Brameier M
    BMC Res Notes (2010) 3:64