miRBase entry: ppy-mir-222

Stem-loop ppy-mir-222

Accession

MI0014873

Description

Pongo pygmaeus ppy-mir-222 precursor miRNA

Gene family

MIPF0000051; mir-221

Sequence

gcugcuggaagguguagguacccucaauggcucaguagccaguguagauccugucuuucguaaucagcAGCUACAUCUGGCUACUGGGUcucugauggcaucuucuagcu
...(((((((((((......((.(((..(((((((((((((((((((...(((...........)))...))))).))))))))))))))..))).))))))))))))).

Structure

gcu           uaggua  c   au              -     auc   ucuu 
   gcuggaaggug      cc uca  ggcucaguagccag uguag   cug    u
   |||||||||||      || |||  |||||||||||||| |||||   |||    c
   cgaucuucuac      gg agu  cUGGGUCAUCGGUC ACAUC   gac    g
--u           ------  u   cu              U     GAc   uaau

Annotation confidence Not enough data

Do you think this miRNA is real?

Genome context

chrX: 46471641-46471750 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from ppy-mir-222

Name	Accession	Chromosome	Start	End	Strand	Confidence

Database links

Mature ppy-miR-222

Accession	MIMAT0015808
Description	Pongo pygmaeus ppy-miR-222 mature miRNA
Sequence	69 - AGCUACAUCUGGCUACUGGGU - 89
Evidence	not_experimental

References

PubMed ID: 20214803
Genome-wide comparative analysis of microRNAs in three non-human primates
Brameier M
BMC Res Notes (2010) 3:64